Two sample MR report


DMAP1_Alveolar Macrophages against bbj-a-88

Date: 13 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 3 -0.2672608 1.0936082 0.8474108
Weighted median 3 0.0993193 0.0287286 0.0005459
Inverse variance weighted 3 0.0964181 0.0218439 0.0000101
Simple mode 3 0.1016745 0.0322874 0.0877688
Weighted mode 3 0.1016008 0.0335076 0.0937252

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 0.0051639 1 0.9427133
Inverse variance weighted 0.1157972 2 0.9437456

Test for directional horizontal pleiotropy

egger_intercept se pval
0.1811845 0.5447259 0.7955784

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
1.81e-05 0 TRUE 0.6930466

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8